{{pics:logo.png?200}} {{pics:skip.png?180}} {{pics:Cost2.jpg?200}} {{pics:skip.png?20}} {{pics:eu2.jpg?90}} ====== COSTNET PUBLICATIONS ====== ===== General ===== - Vinciotti, Veronica, and Ernst C. Wit. "Statistica Neerlandica special issue on Statistical Network Science." Statistica Neerlandica 74.3 (2020): 220-221. - Biagini, Francesca, Göran Kauermann, and Thilo Meyer-Brandis. Network Science. Springer-Verlag, 2019. - Wit, Ernst C. "Big data and biostatistics: The death of the asymptotic Valhalla." Statistics & Probability Letters 136 (2018): 30-33. ===== Graphical models ===== - Castelletti, Federico, et al. "Bayesian learning of multiple directed networks from observational data." Statistics in Medicine (2020). - Roverato, Alberto. Graphical models for categorical data. Cambridge University Press, 2017. - Kamalabad, Mahdi Shafiee, and Marco Grzegorczyk. "A New Partially Segment-Wise Coupled Piece-Wise Linear Regression Model for Statistical Network Structure Inference." International Meeting on Computational Intelligence Methods for Bioinformatics and Biostatistics. Springer, Cham, 2018. - Abbruzzo, Antonino, et al. "Selecting the tuning parameter in penalized Gaussian graphical models." Statistics and Computing 29.3 (2019): 559-569. - Paci, Lucia, and Guido Consonni. "Structural learning of contemporaneous dependencies in graphical VAR models." Computational Statistics & Data Analysis 144 (2020): 106880. - Peluso, Stefano, and Guido Consonni. "Compatible priors for model selection of high-dimensional Gaussian DAGs." Electronic Journal of Statistics 14.2 (2020): 4110-4132. - Castelletti, Federico, and Guido Consonni. "Bayesian inference of causal effects from observational data in Gaussian graphical models." Biometrics (2020). - Bernal, Victor, et al. "Exact hypothesis testing for shrinkage-based Gaussian graphical models." Bioinformatics 35.23 (2019): 5011-5017. - Castelletti, Federico, and Guido Consonni. "Discovering causal structures in Bayesian Gaussian directed acyclic graph models." Journal of the Royal Statistical Society: Series A (Statistics in Society) (2020). - Shafiee Kamalabad, Mahdi, et al. "Partially non-homogeneous dynamic Bayesian networks based on Bayesian regression models with partitioned design matrices." Bioinformatics 35.12 (2019): 2108-2117. - Augugliaro, Luigi, Gianluca Sottile, and Veronica Vinciotti. "The conditional censored graphical lasso estimator." STATISTICS AND COMPUTING (2020). - Behrouzi, Pariya, and Ernst C. Wit. "De novo construction of polyploid linkage maps using discrete graphical models." Bioinformatics 35.7 (2019): 1083-1093. - Augugliaro, Luigi, Antonino Abbruzzo, and Veronica Vinciotti. "ℓ 1-Penalized censored Gaussian graphical model." Biostatistics 21.2 (2020): e1-e16. - Lupparelli, Monia, and Alessandra Mattei. "Joint and marginal causal effects for binary non-independent outcomes." Journal of Multivariate Analysis (2020): 104609. - Shafiee Kamalabad, Mahdi, and Marco Grzegorczyk. "Non-homogeneous dynamic Bayesian networks with edge-wise sequentially coupled parameters." Bioinformatics 36.4 (2020): 1198-1207. - Mahmoudi, Seyed Mahdi, and Ernst C. Wit. "Estimating causal effects from nonparanormal observational data." The International Journal of Biostatistics 14.2 (2018). ===== Random graph ===== - Reinert, Gesine, and Nathan Ross. "Approximating stationary distributions of fast mixing Glauber dynamics, with applications to exponential random graphs." The Annals of Applied Probability 29.5 (2019): 3201-3229. - Lebacher, Michael, and Göran Kauermann. "Regression-based Network Reconstruction with Nodal and Dyadic Covariates and Random Effects." arXiv preprint arXiv:1903.11886 (2019). - Fritz, Cornelius, Michael Lebacher, and Göran Kauermann. "Tempus volat, hora fugit: A survey of tie‐oriented dynamic network models in discrete and continuous time." Statistica Neerlandica 74.3 (2020): 275-299. - Gaunt, Robert E., and Neil Walton. "Stein’s method for the single server queue in heavy traffic." Statistics & Probability Letters 156 (2020): 108566. - Xu, Xiaochuan, and Gesine Reinert. "Triad-based comparison and signatures of directed networks." International Conference on Complex Networks and their Applications. Springer, Cham, 2018. - Kauermann, Göran, and Benjamin Sischka. "Bayesian and Spline based Approaches for (EM based) Graphon Estimation." arXiv preprint arXiv:1903.06936 (2019). - De Nicola, Giacomo, Benjamin Sischka, and Göran Kauermann. "Mixture Models and Networks--Overview of Stochastic Blockmodelling." arXiv preprint arXiv:2005.09396 (2020). - Cutillo, Luisa, and Mirko Signorelli. "An inferential procedure for community structure validation in networks." arXiv preprint arXiv:1710.06611 (2017). - Kevork, Sevag, and Göran Kauermann. "Iterative Estimation of Mixed Exponential Random Graph Models with Nodal Random Effects." arXiv preprint arXiv:1911.02397 (2019). - Lovato, Ilenia, et al. "Model-free two-sample test for network-valued data." Computational Statistics & Data Analysis 144 (2020): 106896. - Signorelli, Mirko, and Ernst C. Wit. "Model-based clustering for populations of networks." Statistical Modelling 20.1 (2020): 9-29. - Cugmas, Marjan, Aleš Žiberna, and Anuška Ferligoj. "Mechanisms Generating Asymmetric Core-Cohesive Blockmodels." Advances in Methodology & Statistics/Metodoloski zvezki 16.1 (2019). - Avrachenkov, Konstantin, Lasse Leskelä, and Maximilien Dreveton. "Estimation of Static Community Memberships from Temporal Network Data." arXiv preprint arXiv:2008.04790 (2020). - Cutillo, Luisa, and Mirko Signorelli. "On community structure validation in real networks." arXiv preprint arXiv:1710.06611 (2017). - Kolaczyk, Eric D. Topics at the Frontier of Statistics and Network Analysis:(re) visiting the Foundations. Cambridge University Press, 2017. ===== Network science ===== - Geler, Zoltan, et al. "Time-Series Classification with Constrained DTW Distance and Inverse-Square Weighted k-NN." 2020 International Conference on INnovations in Intelligent SysTems and Applications (INISTA). IEEE, 2020. - Artico, I., et al. "How rare are power-law networks really?." Proceedings of the Royal Society A 476.2241 (2020): 20190742. - Lucas, Maxime, Giulia Cencetti, and Federico Battiston. "Multiorder Laplacian for synchronization in higher-order networks." Physical Review Research 2.3 (2020): 033410. - Haselimashhadi, Hamed. "A unified class of penalties with the capability of producing a differentiable alternative to l 1 norm penalty." Communications in Statistics-Theory and Methods 48.22 (2019): 5530-5545. - Wegner, Anatol E., et al. "Identifying networks with common organizational principles." arXiv preprint arXiv:1704.00387 (2017). - Geler, Zoltan, et al. "Weighted kNN and constrained elastic distances for time-series classification." Expert Systems with Applications 162 (2020): 113829. - Rodríguez, Jorge P., Fakhteh Ghanbarnejad, and Víctor M. Eguíluz. "Particle velocity controls phase transitions in contagion dynamics." Scientific reports 9.1 (2019): 1-9. - Millán, Ana P., et al. "Complex networks with tuneable dimensions as a universality playground." arXiv preprint arXiv:2006.10421 (2020). - Milán, Janosov, et al. "Elites, communities and the limited benefits of mentorship in electronic music." Scientific Reports (Nature Publisher Group) 10.1 (2020). - Acer, Seher, Oguz Selvitopi, and Cevdet Aykanat. "Addressing Volume and Latency Overheads in 1D-parallel Sparse Matrix-Vector Multiplication." European Conference on Parallel Processing. Springer, Cham, 2017. - Erkuş, Ekin Can, and Vilda Purutçuoğlu. "Outlier detection and quasi-periodicity optimization algorithm: Frequency domain based outlier detection (FOD)." European Journal of Operational Research (2020). - Avrachenkov, Konstantin, Arun Kadavankandy, and Nelly Litvak. "Mean field analysis of personalized PageRank with implications for local graph clustering." Journal of statistical physics 173.3-4 (2018): 895-916. - Šubelj, Lovro. "Convex skeletons of complex networks." Journal of The Royal Society Interface 15.145 (2018): 20180422. - Lucas, Maxime, Giulia Cencetti, and Federico Battiston. "A multi-order Laplacian framework for the stability of higher-order synchronization." arXiv preprint arXiv:2003.09734 (2020). - Elliott, Andrew, et al. "Core–periphery structure in directed networks." Proceedings of the Royal Society A 476.2241 (2020): 20190783. - Selvitopi, Oguz, Seher Acer, and Cevdet Aykanat. "A recursive hypergraph bipartitioning framework for reducing bandwidth and latency costs simultaneously." IEEE Transactions on Parallel and Distributed Systems 28.2 (2016): 345-358. - Avrachenkov, Konstantin, Patrick Brown, and Nelly Litvak. "Red Light Green Light Method for Solving Large Markov Chains." arXiv preprint arXiv:2008.02710 (2020). - Selvitopi, Oguz, and Cevdet Aykanat. "Reducing latency cost in 2D sparse matrix partitioning models." Parallel Computing 57 (2016): 1-24. ===== Social and Ecology ===== - Naglić, Luka, and Lovro Šubelj. "War pact model of shrinking networks." PloS one 14.10 (2019): e0223480. - De Benedictis, Luca, Roberto Rondinelli, and Veronica Vinciotti. "The network structure of cultural distances." arXiv preprint arXiv:2007.02359 (2020). - Cugmas M, Ferligoj A, Žiberna A (2018) Generating global network structures by triad types. PLoS ONE 13(5): e0197514. [[https://doi.org/10.1371/journal.pone.0197514|www]] - Cugmas, Marjan, et al. "The social support networks of elderly people in Slovenia during the Covid-19 pandemic." (2020). - De Benedictis, Luca, and Silvia Leoni. "Gender bias in the Erasmus network of universities." Applied Network Science 5.1 (2020): 1-25. - Lebacher, Michael, Paul W. Thurner, and Göran Kauermann. "Censored Regression for Modelling International Small Arms Trading and its" Forensic" Use for Exploring Unreported Trades." arXiv preprint arXiv:1902.09292 (2019). - Cugmas, Marjan, et al. "Symmetric core-cohesive blockmodel in preschool children’s interaction networks." PloS one 15.1 (2020): e0226801. - Jarynowski, Andrzej, Alexander Semenov, and Vitaly Belik. "Protest perspective against COVID-19 risk mitigation strategies on the German Internet." - Buda, Andrzej, Andrzej Jarynowski.and Katarzyna Kuzmicz. "An attempt to unified approach to the evolution of products in the entertainment industry." E-methodology 6.6 (2019): 80-93. - Cencetti, Giulia, et al. "Temporal properties of higher-order interactions in social networks." arXiv preprint arXiv:2010.03404 (2020). - Lozano, Vanessa, et al. "Modelling Acacia saligna invasion in a large Mediterranean island using PAB factors: A tool for implementing the European legislation on invasive species." Ecological Indicators 116 (2020): 106516. - Batagelj, Vladimir, and Daria Maltseva. "Temporal bibliographic networks." Journal of Informetrics 14.1 (2020): 101006. - Janosov, Milán, et al. "Elites, communities and the limited benefits of mentorship in electronic music." Scientific reports 10.1 (2020): 1-8. - Jarynowski, Andrzej, and Vitaly Belik. "Choroby przenoszone drogą płciową w dobie Internetu i e-zdrowia: kalkulatory ryzyka." (2018). - Richter, Francisco, et al. "Introducing a general class of species diversification models for phylogenetic trees." Statistica Neerlandica (2020). - Ranciati, Saverio, Veronica Vinciotti, and Ernst C. Wit. "Identifying overlapping terrorist cells from the Noordin Top actor–event network." Annals of Applied Statistics 14.3 (2020): 1516-1534. - Lebacher, Michael, Paul W. Thurner, and Göran Kauermann. "Exploring dependence structures in the international arms trade network: a network autocorrelation approach." Statistical Modelling 20.2 (2020): 195-218. - Bauer, Verena, Dietmar Harhoff, and Göran Kauermann. "A smooth dynamic network model for patent collaboration data." arXiv preprint arXiv:1909.00736 (2019). - Jarynowski, Andrzej, Michał B. Paradowski, and Andrzej Buda. "Modelling communities and populations: an introduction to computational social science." (2019). - Šubelj, Lovro, et al. "Convexity in scientific collaboration networks." Journal of Informetrics 13.1 (2019): 10-31. - Signorelli, Mirko, and Ernst C. Wit. "A penalized inference approach to stochastic block modelling of community structure in the Italian Parliament." arXiv preprint arXiv:1607.08743 (2016). - Užupytė, Rūta, and Ernst C. Wit. "Test for triadic closure and triadic protection in temporal relational event data." Social Network Analysis and Mining 10.1 (2020): 1-12. - Schneble, Marc, and Göran Kauermann. "Estimation of Latent Network Flows in Bike-Sharing Systems." arXiv preprint arXiv:2001.08146 (2020). - Wegner, Anatol E., et al. "Identifying networks with common organizational principles." Journal of Complex Networks 6.6 (2018): 887-913. - Paradowski, Michał B., et al. "Peer interactions and second language learning: The contributions of social network analysis in immersion/study abroad vs at-home environments-preprint." (2020). - Maltseva, Daria, and Vladimir Batagelj. "Towards a systematic description of the field using keywords analysis: main topics in social networks." Scientometrics (2020): 1-26. - Šubelj, Lovro, et al. "Intermediacy of publications." Royal Society Open Science 7.1 (2020): 190207. - Paradowski, Michał B., et al. "Peer interactions and second language learning: The contributions of Social Network Analysis in Immersion/Study Abroad vs Stay-at-Home environments." (2020). - Maltseva, Daria, and Vladimir Batagelj. "iMetrics: the development of the discipline with many names." Scientometrics 125.1 (2020): 313-359. - Perczel, Júlia. "Is Structure Context or Content? A DataDriven Method of Comparing Museum Collections" Život umjetnosti: časopis o modernoj i suvremenoj umjetnosti i arhitekturi 105.2 (2019): 76-109. ===== Management and Finance ===== - Fontana, Magda, et al. "New and atypical combinations: An assessment of novelty and interdisciplinarity." Research Policy 49.7 (2020): 104063. - Lebacher, Michael, et al. "In search of lost edges: a case study on reconstructing financial networks." arXiv preprint arXiv:1909.01274 (2019). - Khraisha, Tamer, and Rosario N. Mantegna. "Network structure and optimal technological innovation." Journal of Complex Networks 8.1 (2020): cnz020. - Fontana, Magda, et al. A bridge over troubled water: interdisciplinarity, novelty, and impact. No. dipe0002. Università Cattolica del Sacro Cuore, Dipartimenti e Istituti di Scienze Economiche (DISCE), 2018. ===== Life sciences ===== - Engebretsen, Solveig. "Contributions to network science in public health." (2019). - Bozhilova, Lyuba V., et al. "COGENT: evaluating the consistency of gene co-expression networks." BioRxiv (2020). - Pardo-Diaz, Javier, et al. "Robust gene coexpression networks using signed distance correlation." BioRxiv (2020). - Ağraz, Melih, and Vilda Purutçuoğlu. "Long-tailed graphical model and frequentist inference of the model parameters for biological networks." Journal of Statistical Computation and Simulation 90.9 (2020): 1591-1605. - Paci, L., and G. Consonni. "Graphical model selection for air quality time series." GRASPA 2019 Conference, Pescara, 15-16 July 2019. Università degli studi di Bergamo, 2019. - Babac, Marina Bagić, and Vedran Mornar. "Resetting the Initial Conditions for Calculating Epidemic Spread: COVID-19 Outbreak in Italy." IEEE Access 8 (2020): 148021-148030. - Bülbül, G. B., V. Purutçuoğlu, and E. Purutçuoğlu. "Novel model selection criteria on sparse biological networks." International Journal of Environmental Science and Technology (2019): 1-6. - Rasero, Javier, et al. "The usefulness of Bayesian graphical modelling with neuropsychological data." (2019). - Cougoul, Arnaud, Xavier Bailly, and Ernst C. Wit. "MAGMA: inference of sparse microbial association networks." BioRxiv (2019): 538579. - Ağraz, Melih, and Vilda Purutçuoğlu. "Extended lasso-type MARS (LMARS) model in the description of biological network." Journal of Statistical Computation and Simulation 89.1 (2019): 1-14. - Pinho, André, et al. "Towards an accurate sleep apnea detection based on ECG signal: The quintessential of a wise feature selection." Applied Soft Computing 83 (2019): 105568. - Britton, Tom, and Gianpaolo Scalia Tomba. "Estimation in emerging epidemics: Biases and remedies." Journal of the Royal Society Interface 16.150 (2019): 20180670. - Petek, Marko, et al. "Cultivar-specific transcriptome and pan-transcriptome reconstruction of tetraploid potato." bioRxiv (2020): 845818. - Fritz, Cornelius, and Göran Kauermann. "On the interplay of regional mobility, social connectedness, and the spread of covid-19 in germany." arXiv preprint arXiv:2008.03013 (2020). - Berta, Paolo, Veronica Vinciotti, and Francesco Moscone. "Does hospital cooperation increase the quality of healthcare?." arXiv preprint arXiv:1911.04168 (2019). - Dar, Elif Doğan, Vilda Purutçuoğlu, and Eda Purutçuoğlu. "Detection of HIV-1 Protease Cleavage Sites via Hidden Markov Model and Physicochemical Properties of Amino Acids." Numerical Solutions of Realistic Nonlinear Phenomena. Springer, Cham, 2020. 171-193. - Souza-Pereira, Leonice, et al. "Clinical Decision Support Systems for Chronic Diseases: A Systematic Literature Review." Computer Methods and Programs in Biomedicine (2020): 105565. - Wit, Ernst C., et al. "Sparse relative risk regression models." Biostatistics 21.2 (2020): e131-e147. - Signorelli, Mirko, Veronica Vinciotti, and Ernst C. Wit. "NEAT: an efficient network enrichment analysis test." BMC bioinformatics 17.1 (2016): 352. - Pellin, Danilo, et al. "Penalized inference of the hematopoietic cell differentiation network via high-dimensional clonal tracking." Applied Network Science 4.1 (2019): 115. - Arani, Babak MS, et al. "Stability estimation of autoregulated genes under Michaelis-Menten-type kinetics." Physical Review E 97.6 (2018): 062407. - Letina, Srebrenka, et al. "Expanding network analysis tools in psychological networks: Minimal spanning trees, participation coefficients, and motif analysis applied to a network of 26 psychological attributes." Complexity 2019 (2019). - Acer, Seher, Oguz Selvitopi, and Cevdet Aykanat. "Optimizing nonzero-based sparse matrix partitioning models via reducing latency." Journal of Parallel and Distributed Computing 122 (2018): 145-158. - Garcia, Nuno M., et al. "Keyed user datagram protocol: concepts and operation of an almost reliable connectionless transport protocol." IEEE Access 7 (2019): 18951-18963. ===== Transportation and flow networks ===== - Martens, Erik Andreas, and Konstantin Klemm. "Cyclic structure induced by load fluctuations in adaptive transportation networks." Progress in Industrial Mathematics at ECMI 2018. Springer, Cham, 2019. 147-155. - Martens, Erik A., and Konstantin Klemm. "Transitions from trees to cycles in adaptive flow networks." Frontiers in Physics 5 (2017): 62. - Rodríguez-García, Jorge Pablo, Fakhteh Ghanbarnejad, and Víctor M. Eguíluz. "Particle velocity controls phase transitions in contagion dynamics." (2019). \\ ====== ====== [[.|Publications]]; [[..:..:costnet|CostNet]]