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====== Pajek for scientometrics ======

Batagelj, V.: [[http://vlado.fmf.uni-lj.si/pub/slides/bibnet16.pdf|Analysis of bibliographic networks]]. PhD course on networks, Uppsala University, November 18, 2016.

Download Pajek from [[http://mrvar.fdv.uni-lj.si/pajek/default.htm|Andrej's site]]. There is also a [[http://mrvar.fdv.uni-lj.si/pajek/pajekman.pdf|manual]]. You can also look at [[pajek:maillist|Pajek's mailing list]].

For detailed introduction to network analysis with Pajek and description of Pajek's capabilities see the book [[http://www.cambridge.org/us/academic/subjects/sociology/research-methods-sociology-and-criminology/exploratory-social-network-analysis-pajek-2nd-edition|ESNA 2]]. For analysis of large networks see the book [[http://eu.wiley.com/WileyCDA/WileyTitle/productCd-0470714522.html|Understanding ...]].

For transforming Web of Sciencs (WoS) data into a collection of Pajek networks you can use a program (in Python) [[http://vladowiki.fmf.uni-lj.si/doku.php?id=pajek:wos2pajek|WoS2Pajek]].

Batagelj, V.: {{pub:pdf:peere4.pdf|Towards temporal bibliographic networks}}. PEERE, Vilnius, March 7, 2017.

Software: Python library [[https://github.com/bavla/Graph|Graph]]; Python library [[https://github.com/bavla/TQ|TQ]].

===== Other resources =====

==== Papers ====

  - Batagelj, V., Praprotnik, S.: An algebraic approach to temporal network analysis based on temporal quantities. [[http://link.springer.com/article/10.1007/s13278-016-0330-4|Social Network Analysis and Mining]], 6(1), 1-22 [[http://link.springer.com/journal/13278|Online]], [[http://arxiv.org/abs/1505.01569|arXiv:1505.01569]]
  - Cerinšek, M., Batagelj, V.: [[http://link.springer.com/article/10.1007/s11192-014-1419-z|Network analysis of Zentralblatt MATH data]]. Scientometrics, 102(2015)1, 977-1001. [[http://arxiv.org/abs/1409.1726|arXiv]]
  - Bodlaj, J, Batagelj, V: [[http://onlinelibrary.wiley.com/doi/10.1002/minf.201400014/abstract|Network Analysis of Publications on Topological Indices from the Web of Science.]] Molecular informatics, Volume 33, Issue 8, pages 514–535, August 2014. DOI: 10.1002/minf.201400014
  - Batagelj, V, Cerinšek, M: [[http://www.springerlink.com/openurl.asp?genre=article&id=doi:10.1007/s11192-012-0940-1|On bibliographic networks]]. Scientometrics  96 (2013) 3, 845-864. (DOI) 10.1007/s11192-012-0940-1. [[http://arxiv.org/abs/1301.4655|arXiv]]
  - Kejžar, N., Korenjak-Černe, S., Batagelj, V.: [[http://www.springerlink.com/content/3k32475jk1003801/|Clustering of Distributions: A Case of Patent Citations]], Journal of Classification (2011), Volume 28, Number 2, 156-183.
  - Batagelj, V., Zaveršnik, M.: [[http://www.springerlink.com/content/c6472216637p57w4/|Fast algorithms for determining (generalized) core groups in social networks]]. Advances in Data Analysis and Classification, 2011. Volume 5, Number 2, 129-145. [[http://arxiv.org/abs/cs/0310049|arXiv 1]]+[[http://arxiv.org/abs/cs/0202039|arXiv 2]]
  - Kejžar, N., Korenjak Černe, S., Batagelj, V.: [[http://www.springerlink.com/content/v660rt6440033841/|
Network Analysis of Works on Clustering and Classification from Web of Science]]. Classification as a Tool for Research. Hermann Locarek-Junge, Claus Weihs eds. Proceedings of IFCS 2009. Studies in Classification, Data Analysis, and Knowledge Organization, Part 3, 525-536, Springer, Berlin, 2010. [[http://pajek.imfm.si/lib/exe/fetch.php?media=dl:gfkl_305.pdf|preprint]]
  - Batagelj, V, Zaveršnik, M: [[http://vlado.fmf.uni-lj.si/vlado/papers/ShortCyc.pdf|Short cycle connectivity]]. DISCRETE MATH 307 (3-5): 310-318 FEB 6 2007 [[http://arxiv.org/abs/cs/0308011|arXiv]]
  - Batagelj, V, Mrvar, A: [[http://vlado.fmf.uni-lj.si/vlado/papers/erdos.pdf|Some analyses of Erdos collaboration graph]]. Social Networks 22(2000), 173-186 (669K)
  - Batagelj, V, Mrvar, A, Zaveršnik, M: [[http://www.springerlink.com/content/95eyf5p7mpmm9ag8/|Partitioning Approach to Visualization of Large Graphs]]. Graph Drawing, Lecture Notes in Computer Science, 1999, Volume 1731/1999, 90-97. ([[http://vlado.fmf.uni-lj.si/pub/networks/doc/part/CorePart.pdf|preprint]])


==== Data sets ====

  * [[http://vlado.fmf.uni-lj.si/pub/networks/data/patents/Patents.htm|The NBER U.S. Patent Citations Data Set]] (old version in Pajek format); [[https://sites.google.com/site/patentdataproject/Home|New data set 1976-2006]]; [[https://eml.berkeley.edu/~bhhall/patents.html|Index]].
  * [[pajek:wos2pajek#networks|WoS2Pajek networks]]
  * [[http://lod.springer.com/wiki/bin/view/Linked+Open+Data/About|LOD for Conferences in Computer Science]]; [[http://lod.springer.com/data/dumps|Download database dump]]
  * [[https://www.microsoft.com/en-us/research/project/microsoft-academic-graph/|Microsoft academic graph]]; {{pub:pdf:magviszards.pdf|Viszards 2016}}; [[https://academicgraph.blob.core.windows.net/graph/index.html|Releases]]
  * DBLP: [[http://dblp.uni-trier.de/faq/How+can+I+download+the+whole+dblp+dataset|Data set download]]