====== Format of temporal networks files ======
[[notes:time|Temporal networks]], [[tq:time:proj|Project]], [[tq:Ianus|Ianus]], [[tq:time:proj:task|Tasks]]
The Ianus format is similar to Pajek format with some improvements.
File types:
* ''tes'' - network data set
* ''ten'' - temporal network description
* ''tev'' - temporal vector
* ''tep'' - temporal partition
Metadata fields:
* re - begin record
* er - end record
* au - author(s)
* ti - record title
* de - description
* ci - reference, citation
* ur - URL / URI
* dt - date
* cr - copyright
===== ten - temporal network description =====
%Ianus
*metadata
re
au Roberto Franzosi
ti “Red Years” and “Black Years” (1919-22)
de Roberto Franzosi collected from the journal news in the period (January 1919 -
December 1922) information about the different types of interacttions between
political parties and other groups of people in Italy.
The violence network contains only the data about violent actions and counts
the number of interactions per month. It was crated for a presentation at the
ECPR summer school, Ljubljana, July 19-August 4, 2007.
ur http://vlado.fmf.uni-lj.si/pub/networks/doc/ecpr/07/franzosi.htm
dt July 29, 2007
er
re
au Vladimir Batagelj, Roberto Franzosi, Andrej Mrvar
ti transformation to Pajek format
dt July 29, 2007
de The original data were transformed in Pajek format: all types of violent actions
were considered as a single type - violence; different similar groups of people
were reduced to 29 classes.
er
re
au Vladimir Batagelj
ti transformation to Ianus format
dt April 16, 2014
The data in Pajek format were transformed into Ianus format.
er
*network:simple violence
*timescale 1 49
1 "Jan-19"
2 "Feb-19"
3 "Mar-19"
4 "Apr-19"
...
47 "Nov-22"
48 "Dec-22"
49 "Jan-23"
*nodes 29
1 "undefined"
2 "?"
3 "people"
4 "police"
...
27 "prisoners/arrested"
28 "foreigners"
29 "liberals"
*arcs
1 1 [(16, 17, 1), (19, 20, 1), (20, 21, 3), (21, 22, 18), (26, 28, 11), (28, 29, 3), ...
1 3 [(7, 8, 4), (21, 22, 1), (25, 26, 1), (26, 27, 2), (27, 29, 5), (29, 30, 1), ...
1 4 [(17, 18, 2), (19, 20, 1), (31, 32, 1)]
1 6 [(27, 28, 1), (37, 38, 1)]
1 7 [(25, 28, 1), (28, 29, 5), (29, 30, 3), (30, 31, 5), (31, 32, 2), (32, 33, 1), ...
1 8 [(28, 29, 1), (29, 30, 2), (43, 44, 1)]
...
%Ianus
*metadata
re
au SocioPatterns
ti Hospital ward dynamic contact network
de This dataset contains the temporal network of contacts between patients,
patients and health-care workers (HCWs) and among HCWs in a hospital ward
in Lyon, France, from Monday, December 6, 2010 at 1:00 pm to Friday,
December 10, 2010 at 2:00 pm. The study included 46 HCWs and 29 patients.
The file contains a tab-separated list representing the active contacts
during 20-second intervals of the data collection. Each line has the form
“t i j Si Sj“, where i and j are the anonymous IDs of the persons in
contact, Si and Sj are their statuses (NUR=paramedical staff, i.e. nurses
and nurses’ aides; PAT=Patient; MED=Medical doctor; ADM=administrative
staff), and the interval during which this contact was active is
[ t - 20s, t ]. If multiple contacts are active in a given interval, you
will see multiple lines starting with the same value of t. Time is measured
in seconds.
cr The data are distributed to the public under a Creative Commons
Attribution-NonCommercial-ShareAlike license. When this data is used in
published research or for visualization purposes, please cite the
following paper "Estimating Potential Infection ...". Please also
acknowledge the SocioPatterns collaboration and provide a link to
http://www.sociopatterns.org.
ci P. Vanhems et al., Estimating Potential Infection Transmission Routes in
Hospital Wards Using Wearable Proximity Sensors, PLoS ONE 8(9): e73970 (2013).
ur http://www.sociopatterns.org/datasets/hospital-ward-dynamic-contact-network
dt September 14, 2013
er
re
au Vladimir Batagelj
ti transformation to Ianus format
dt May 12, 2014
The data from Sociopatterns were transformed into Ianus format.
er
*network:simple hospital
*timescale 120 347640
*nodes 75
1 "1157"
2 "1232"
3 "1191"
...
72 "1547"
73 "1784"
74 "1629"
75 "1671"
*arcs
7 3 [(101600, 101660, 1), (103280, 103360, 1)]
11 68 [(256960, 257060, 1), (257120, 257160, 1), (257180, 257240, 1), (326000, 326020, 1)]
27 46 [(245100, 245220, 1), (247460, 247540, 1), (247560, 247580, 1), (250820, 251300, 1), ...
33 55 [(268440, 268460, 1), (272840, 272860, 1)]
47 35 [(91380, 91400, 1), (154840, 154900, 1), (155060, 155100, 1)]
...
The node activity sets are described with a group of lines starting with a keyword ''*activity'' followed by a description of a
partition specifying the activity sets.
**Examples:** {{tq:zip:sn5cn.zip}}, {{tq:zip:violence.zip}}, {{tq:zip:hospital.zip}}, {{tq:zip:terror.zip}}
===== tep - temporal partition =====
For vectors and partitions the description file starts with
*nodes n
followed by lines of form
//i TQi//
or
//i vi//
where //i// is a node number and //TQi// is the corresponding temporal quantity or
//vi// is the corresponding value if the value is constant.
The value //c// in TQ triples in description of a partition tells that the
element belongs to class //c//.
In a description of a partition we can provide also a legend assigning
meaning to its classes.
%Ianus
*nodes 75
*legend
1 NUR - paramedical staff, i.e. nurses and nurses’ aides
2 PAT - patient
3 MED - medical doctor
4 ADM - administrative staff
*data
1 3
2 4
3 3
4 3
5 3
6 3
7 1
8 1
....
Examples: ''hospital.tep'' in {{tq:zip:hospital.zip}}
===== tev - temporal vector =====